Detailed Guides

Here are some detailed guides that (we hope) will make it easier to use and understand various parts of sire.

• Searching
  • Views
  • Identifiers
  • Numbers
  • Strings
  • Comparisons
  • Logical operators
  • Returned View Types
  • Expansive (with) and Contractive (in) Searches
  • Match All Atoms, Residues, Chains etc.
  • Advanced with and in Searches
  • Searching for Bonds using in, with, from and to
  • Searching by Chemical Element
  • Searching by Count (i.e. Number of Atoms)
  • Searching by Charge or Mass
  • Searching by Charge using Approximate Comparisons
  • Searching by Property
  • Finding the Nth View that Matches
  • Searching by Distance
  • Searching for Water or Protein Molecules
  • Creating Custom Search Tokens