Contents Menu Expand Light mode Dark mode Auto light/dark mode
openbiosim - sire
Logo
Branch
  • Features
  • Installation
  • Quick Start Guide
  • Tutorial
    • Part 1 - Loading and Saving
      • Importing sire
      • Loading a molecule
      • Simple indexing
      • Saving a molecule
      • Loading from multiple files
      • Supported file formats
    • Part 2 - Indexing and Searching
      • Indexing Atoms
      • Indexing Residues
      • Indexing Chains
      • Indexing Segments
      • Indexing Molecules
      • Indexing Bonds
      • Indexing Angles
      • Indexing Dihedrals
      • Indexing Impropers
      • Searching
    • Part 3 - Molecular Properties
      • Atom Properties
      • Cursors and Editing Properties
      • Residue, Chain and Segment Properties
      • Molecule Properties
      • Bond Views and Properties
      • Angle Views and Properties
      • Dihedral Views and Properties
      • Improper Views and Properties
    • Part 4 - Measurement, Trajectories and Movement
      • Measuring Distances and Angles
      • Measuring Trajectories
      • Measuring Energies
      • Measuring Energies Across Trajectories
      • Moving Atoms and Molecules
      • Moving Bonds, Angles and Dihedrals
    • Part 5 - Interconverting with other Packages
      • Converting Molecules
      • Viewing Molecules in 2D
      • Creating Molecules from Smiles Strings
      • Molecular Dynamics and Minimisation
  • Detailed Guides
    • Searching
    • Viewing Molecules
    • OpenMM Integration
  • Documentation
    • sire module
    • Sub-modules
      • sire.base
        • Public API
      • sire.cas
        • Public API
      • sire.convert
        • Public API
      • sire.io
        • Public API
      • sire.maths
        • Public API
      • sire.mm
        • Public API
      • sire.mol
        • Public API
      • sire.search
        • Public API
      • sire.stream
        • Public API
      • sire.system
        • Public API
      • sire.units
        • Public API
      • sire.utils
        • Public API
      • sire.vol
        • Public API
  • How to ask for help
  • Contributing
    • Developer’s guide
    • Coding Style
    • Packaging releases
    • Roadmap
  • Contributors
  • Code of Conduct
  • Changelog
  • Acknowledgements
Back to top

Sub-modules#

  • sire.base
    • Public API
  • sire.cas
    • Public API
  • sire.convert
    • Public API
  • sire.io
    • Public API
  • sire.maths
    • Public API
  • sire.mm
    • Public API
  • sire.mol
    • Public API
  • sire.search
    • Public API
  • sire.stream
    • Public API
  • sire.system
    • Public API
  • sire.units
    • Public API
  • sire.utils
    • Public API
  • sire.vol
    • Public API
Next
sire.base
Previous
sire module
Made with Furo
Last updated on Mar 27, 2023